Package: OdysseusPathwayModule 0.0.1

OdysseusPathwayModule: Cohort Pathway Analysis with Pre-Index Event Support

Provides cohort pathway analysis for Observational Medical Outcomes Partnership (OMOP) Common Data Model databases, including both standard (post-index) and pre-index pathway analyses. The pre-index analysis identifies sequences of events occurring in a lookback window before the target cohort index date. Built on the 'CohortPathways' analysis framework originally developed by Christopher Knoll and the Observational Health Data Sciences and Informatics community through 'WebAPI'. Methodological background and the originating implementation are described in <https://github.com/OHDSI/CohortPathways>.

Authors:Alexander Alexeyuk [aut, cre]

OdysseusPathwayModule_0.0.1.tar.gz
OdysseusPathwayModule_0.0.1.zip(r-4.7)OdysseusPathwayModule_0.0.1.zip(r-4.6)OdysseusPathwayModule_0.0.1.zip(r-4.5)
OdysseusPathwayModule_0.0.1.tgz(r-4.6-any)OdysseusPathwayModule_0.0.1.tgz(r-4.5-any)
OdysseusPathwayModule_0.0.1.tar.gz(r-4.7-any)OdysseusPathwayModule_0.0.1.tar.gz(r-4.6-any)
OdysseusPathwayModule_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
OdysseusPathwayModule/json (API)

# Install 'OdysseusPathwayModule' in R:
install.packages('OdysseusPathwayModule', repos = c('https://a1exanderalexeyuk.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openjdk– OpenJDK Java runtime, using Hotspot JIT

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openjdk

2.00 score 504 downloads 2 exports 42 dependencies

Last updated from:6d689cac96. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK149
source / vignettesOK237
linux-release-x86_64OK142
macos-release-arm64OK155
macos-oldrel-arm64OK79
windows-develOK72
windows-releaseOK75
windows-oldrelOK78
wasm-releaseOK115

Exports:buildEventSequenceGraphexecuteCohortPathways

Dependencies:backportsbitbit64blobcheckmateclicliprcpp11crayonDatabaseConnectorDBIdbplyrdigestdplyrgenericsgluehmslifecyclemagrittrpillarpkgconfigprettyunitsprogresspurrrR6RcppreadrrJavarlangSqlRenderstringistringrtibbletidyrtidyselecttriebeardtzdburltoolsutf8vctrsvroomwithr

Using OdysseusPathwayModule

Rendered fromusing-odysseus-pathway-module.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-04-21
Started: 2026-04-21